Transcript: lnc-FOXD4L5-46:1

Basic information

LNCipedia transcript ID: lnc-FOXD4L5-46:1 
LNCipedia gene ID: lnc-FOXD4L5-46
Location (hg38): chr9:60918581-60927822
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1988 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016
Alternative transcript names: NONHSAT131257; ENST00000611916.1
Alternative gene names: ENSG00000275628.1; RP11-144A16.6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -23.737 non-coding 
CPAT coding probability 31.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FOXD4L5-46:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM75A4-6:1
4.0 lnc-FAM75A4-6:1
4.1 lnc-FAM75A4-6:1
5.0 lnc-FAM75A4-6:1
5.1 lnc-ZFAND5-102:1
5.2 lnc-FOXD4L5-46:1