Transcript: lnc-FOXD4L5-80:3

Basic information

LNCipedia transcript ID: lnc-FOXD4L5-80:3 
LNCipedia gene ID: lnc-FOXD4L5-80
Ensembl Gene ID: ENSG00000229422
Ensembl Transcript ID: ENST00000417533
Location (hg38): chr9:62837139-62838302
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1164 bp
Exons: 1
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000417533.2
Alternative gene names: ENSG00000229422.2; AL512625.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 295.6481 coding 
CPAT coding probability 87.51% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-FOXD4L5-80:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-ZFAND5-80:3
5.1 lnc-ZFAND5-80:3
5.2 lnc-FOXD4L5-80:3