Transcript: lnc-FOXD4L6-1:15

Basic information

LNCipedia transcript ID: lnc-FOXD4L6-1:15 
LNCipedia gene ID: lnc-FOXD4L6-1
Location (hg38): chr9:41100994-41102525
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 364 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00016333
Alternative gene names: XLOC_007714; linc-FAM75A7-8


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -115.6616 non-coding 
CPAT coding probability 1.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FOXD4L6-1:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FOXD4L6-1:14
3.1 lnc-FOXD4L6-1:15
4.0 lnc-FOXD4L6-1:15
4.1 lnc-FOXD4L6-1:15
5.0 lnc-FOXD4L6-1:15
5.1 lnc-SHB-37:16
5.2 lnc-FOXD4L6-1:15