Transcript: lnc-FOXD4L6-1:3

Basic information

LNCipedia transcript ID: lnc-FOXD4L6-1:3 
LNCipedia gene ID: lnc-FOXD4L6-1
Location (hg38): chr9:41101013-41108389
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2888 bp
Exons: 5
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00016334; NONHSAT131654
Alternative gene names: XLOC_007714; linc-FAM75A7-8


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 23.6096 non-coding 
CPAT coding probability 1.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FOXD4L6-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FOXD4L6-1:3
3.1 lnc-FOXD4L6-1:3
4.0 lnc-FOXD4L6-1:3
4.1 lnc-FOXD4L6-1:3
5.0 lnc-FOXD4L6-1:3
5.1 lnc-SHB-37:3
5.2 lnc-FOXD4L6-1:3