Transcript: lnc-FOXD4L6-2:1

Basic information

LNCipedia transcript ID: lnc-FOXD4L6-2:1 
LNCipedia gene ID: lnc-FOXD4L6-2
Location (hg38): chr9:41196233-41199192
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 211 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00016337; NONHSAT131669
Alternative gene names: XLOC_007715; linc-CBWD6-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.6076 non-coding 
CPAT coding probability 0.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FOXD4L6-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FOXD4L6-2:1
3.1 lnc-FOXD4L6-2:1
4.0 lnc-FOXD4L6-2:1
4.1 lnc-FOXD4L6-2:1
5.0 lnc-FOXD4L6-2:1
5.1 lnc-SHB-38:1
5.2 lnc-FOXD4L6-2:1