Transcript: lnc-FOXG1-12:2

Basic information

LNCipedia transcript ID: lnc-FOXG1-12:2 
LNCipedia gene ID: lnc-FOXG1-12
Location (hg38): chr14:28859059-28861751
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 885 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT036174; FPKM1_group_8633_transcript_3
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -141.1307 non-coding 
CPAT coding probability 0.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FOXG1-12:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C14orf23-7:1
4.0 lnc-C14orf23-12:1
4.1 lnc-C14orf23-12:1
5.0 lnc-C14orf23-12:1
5.1 lnc-G2E3-18:1
5.2 lnc-FOXG1-12:2