Transcript: lnc-FOXG1-22:4

Basic information

LNCipedia transcript ID: lnc-FOXG1-22:4 
LNCipedia gene ID: lnc-FOXG1-22
Location (hg38): chr14:27133996-27206064
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 271 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT140154; FPKM1_group_8607_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -321.079 non-coding 
CPAT coding probability 0.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FOXG1-22:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FOXG1-4:4
4.0 lnc-FOXG1-4:4
4.1 lnc-FOXG1-4:4
5.0 lnc-FOXG1-4:4
5.1 lnc-G2E3-29:4
5.2 lnc-FOXG1-22:4