Transcript: lnc-FOXI2-1:2

Basic information

LNCipedia transcript ID: lnc-FOXI2-1:2 
LNCipedia gene ID: lnc-FOXI2-1
Location (hg38): chr10:127919528-127936352
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 639 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000227076.1|ENCT00000051402.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -121.4798 non-coding 
CPAT coding probability 2.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FOXI2-1:2 no no no no

Available literature

  1. Cao (2013), Analysis of long non-coding RNA expression profiles in gastric cancer., World J. Gastroenterol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FOXI2-1:2
5.0 lnc-FOXI2-1:2
5.1 lnc-FOXI2-1:2
5.2 lnc-FOXI2-1:2