Transcript: lnc-FOXI3-7:1

Basic information

LNCipedia transcript ID: lnc-FOXI3-7:1 
LNCipedia gene ID: lnc-FOXI3-7
Location (hg38): chr2:88468318-88472632
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1796 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_1884_chr2:88767835-88772150_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -6.1802 non-coding 
CPAT coding probability 0.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FOXI3-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-EIF2AK3-7:1
4.0 lnc-EIF2AK3-7:1
4.1 lnc-EIF2AK3-7:1
5.0 lnc-EIF2AK3-7:1
5.1 lnc-ZNF514-109:1
5.2 lnc-FOXI3-7:1