Transcript: lnc-FOXO1-2:3
Basic information
LNCipedia transcript ID: lnc-FOXO1-2:3
HGNC Gene Symbol: lnc-FOXO1-2
HGNC Full Gene Name:
long intergenic non-protein coding RNA 548
Ensembl Gene ID:
ENSG00000215483
Ensembl Transcript ID:
ENST00000617777
RefSeq ID:
NR_033877
Location (hg38): chr13:40194509-40220502
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2551 bp
Exons: 6
Sources: Broad Institute; NONCODE v4; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: TCONS_00021475; NONHSAT033321; NR_033877; ENST00000617777.1; NR_033877.1
Alternative gene names: XLOC_010577; linc-LHFP; ENSG00000278772.1; LINC00548; ENSG00000215483.9; LINC00598; ENSG00000215483.10
RNA sequence:
Structure:
Protein coding potential
In stringent set: yes
Locus conservation
| Locus conservation? |  |
 |
 |
 |
|---|---|---|---|---|
| lnc-FOXO1-2:3 | no | no | no | no |
Available literature
- Jeong (2016), Long noncoding RNA linc00598 regulates CCND2 transcription and modulates the G1 checkpoint., Sci Rep
- Qiao (2003), Identification of a novel fusion gene, TTL, fused to ETV6 in acute lymphoblastic leukemia with t(12;13)(p13;q14), and its implication in leukemogenesis., Leukemia
LNCipedia transcript ID history
| LNCipedia version | LNCipedia transcript ID |
|---|---|
| 1.3 | lnc-FOXO1-2:3 |
| 3.1 | lnc-FOXO1-2:3 |
| 4.0 | lnc-FOXO1-2:3 |
| 4.1 | lnc-FOXO1-2:3 |
| 5.0 | lnc-FOXO1-2:3 |
| 5.1 | lnc-CCDC169-53:33 |
| 5.2 | lnc-FOXO1-2:3 |