Transcript: lnc-FPGS-2:1

Basic information

LNCipedia transcript ID: lnc-FPGS-2:1 
LNCipedia gene ID: lnc-FPGS-2
Location (hg38): chr9:127940295-127940952
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 546 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000415141.1; RP11-203J24.8-001; OTTHUMT00000054306.1
Alternative gene names: ENSG00000227218.1; RP11-203J24.8; OTTHUMG00000020721.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -140.9899 non-coding 
CPAT coding probability 25.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FPGS-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FPGS-2:1
4.0 lnc-FPGS-2:1
4.1 lnc-FPGS-2:1
5.0 lnc-FPGS-2:1
5.1 lnc-PTPA-75:10
5.2 lnc-FPGS-2:1