Transcript: lnc-FPGS-2:7

Basic information

LNCipedia transcript ID: lnc-FPGS-2:7 
LNCipedia gene ID: lnc-FPGS-2
Ensembl Gene ID: ENSG00000227218
Ensembl Transcript ID: ENST00000587355
Location (hg38): chr9:127937922-127940855
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 834 bp
Exons: 4
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT134877; ENST00000587355.1; ENST00000587355.5
Alternative gene names: ENSG00000227218.3; RP11-203J24.8; ENSG00000227218.7; AL157935.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -110.8716 non-coding 
CPAT coding probability 43.20% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-FPGS-2:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FPGS-2:7
4.0 lnc-FPGS-2:7
4.1 lnc-FPGS-2:7
5.0 lnc-FPGS-2:7
5.1 lnc-PTPA-75:6
5.2 lnc-FPGS-2:7