Transcript: lnc-FPR1-2:1

Basic information

LNCipedia transcript ID: lnc-FPR1-2:1 
LNCipedia gene ID: lnc-FPR1-2
Location (hg38): chr19:51839924-51843324
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 423 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015
Alternative transcript names: NONHSAT067484; ENST00000594725.1
Alternative gene names: ENSG00000269483.1; AC006272.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -24.0923 non-coding 
CPAT coding probability 2.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FPR1-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF577-2:1
4.0 lnc-ZNF577-2:1
4.1 lnc-ZNF577-2:1
5.0 lnc-ZNF577-2:1
5.1 lnc-FAM71E1-53:1
5.2 lnc-FPR1-2:1