Transcript: lnc-FRG1-10:1

Basic information

LNCipedia transcript ID: lnc-FRG1-10:1 
LNCipedia gene ID: lnc-FRG1-10
Location (hg38): chr4:190065233-190065914
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 682 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT099821
Alternative gene names: DBE-T; DUX4L30


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.7849 non-coding 
CPAT coding probability 65.82% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-FRG1-10:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DUX4L7-2:1
4.0 DBET:3
4.1 DBET:3
5.0 DBET:3
5.1 lnc-TRIML1-20:1
5.2 lnc-FRG1-10:1