Transcript: lnc-FRRS1L-1:1

Basic information

LNCipedia transcript ID: lnc-FRRS1L-1:1 
LNCipedia gene ID: lnc-FRRS1L-1
Location (hg38): chr9:109130293-109135938
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 5646 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000561981.1; RP11-526J3.3-001; OTTHUMT00000430091.1; NONHSAT133936
Alternative gene names: ENSG00000260230.1; RP11-526J3.3; OTTHUMG00000175466.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 12.1434 non-coding 
CPAT coding probability 0.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FRRS1L-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C9orf4-1:1
4.0 lnc-C9orf4-1:1
4.1 lnc-C9orf4-1:1
5.0 lnc-C9orf4-1:1
5.1 lnc-SLC46A2-62:1
5.2 lnc-FRRS1L-1:1