Transcript: lnc-FSCB-1:11

Basic information

LNCipedia transcript ID: lnc-FSCB-1:11 
HGNC Gene Symbol: lnc-FSCB-1    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2302
Ensembl Gene ID: ENSG00000258998
Ensembl Transcript ID: ENST00000556405
Location (hg38): chr14:44763157-44782829
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2904 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000556405; ENST00000556405.1; RP11-398E10.1-001; OTTHUMT00000410081.1; NONHSAT036618
Alternative gene names: ENSG00000258998; RP11-398E10.1; ENSG00000258998.1; OTTHUMG00000170717.1; LINC02302


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 15.5371 non-coding 
CPAT coding probability 0.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FSCB-1:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KLHL28-1:1
3.1 lnc-KLHL28-3:1
4.0 lnc-KLHL28-5:1
4.1 lnc-FSCB-1:11
5.0 lnc-FSCB-1:11
5.1 lnc-RTN1-160:1
5.2 lnc-FSCB-1:11