Transcript: lnc-FSCN1-1:3

Basic information

LNCipedia transcript ID: lnc-FSCN1-1:3 
LNCipedia gene ID: lnc-FSCN1-1
RefSeq ID: NR_126168
Location (hg38): chr7:5513854-5525545
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1826 bp
Exons: 4
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_126168; NR_126168.1
Alternative gene names: LOC221946


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 22.1279 non-coding 
CPAT coding probability 17.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FSCN1-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FSCN1-1:3
4.0 lnc-FSCN1-1:3
4.1 lnc-FSCN1-1:3
5.0 lnc-FSCN1-1:3
5.1 lnc-SLC29A4-8:3
5.2 lnc-FSCN1-1:3