Transcript: lnc-FSIP1-4:28

Basic information

LNCipedia transcript ID: lnc-FSIP1-4:28 
LNCipedia gene ID: lnc-FSIP1-4
Location (hg38): chr15:39188438-39194324
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1976 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000259450.1|ENST00000560743.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -137.8565 non-coding 
CPAT coding probability 2.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FSIP1-4:28 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FSIP1-4:28
5.0 lnc-FSIP1-4:28
5.1 lnc-VPS39-60:28
5.2 lnc-FSIP1-4:28