Transcript: lnc-FSIP1-4:31

Basic information

LNCipedia transcript ID: lnc-FSIP1-4:31 
LNCipedia gene ID: lnc-FSIP1-4
Location (hg38): chr15:38881473-39194324
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4690 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000259345.1|FTMT25700013095.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 0.3326 non-coding 
CPAT coding probability 1.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FSIP1-4:31 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FSIP1-4:31
5.0 lnc-FSIP1-4:31
5.1 lnc-VPS39-60:27
5.2 lnc-FSIP1-4:31