Transcript: lnc-FSIP1-4:32

Basic information

LNCipedia transcript ID: lnc-FSIP1-4:32 
LNCipedia gene ID: lnc-FSIP1-4
Location (hg38): chr15:39188465-39194309
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1934 bp
Exons: 2
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000513397
Alternative gene names: ENSG00000251318


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -137.8565 non-coding 
CPAT coding probability 4.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FSIP1-4:32 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FSIP1-3:1
3.1 lnc-FSIP1-7:2
4.0 lnc-FSIP1-7:2
4.1 lnc-FSIP1-4:32
5.0 lnc-FSIP1-4:32
5.1 lnc-VPS39-60:29
5.2 lnc-FSIP1-4:32