Transcript: lnc-FSIP1-4:40

Basic information

LNCipedia transcript ID: lnc-FSIP1-4:40 
LNCipedia gene ID: lnc-FSIP1-4
Location (hg38): chr15:38881473-39118723
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4748 bp
Exons: 6
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000259345.1|FTMT25700059063.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 0.3326 non-coding 
CPAT coding probability 3.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FSIP1-4:40 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FSIP1-4:40
5.0 lnc-FSIP1-4:40
5.1 lnc-VPS39-60:37
5.2 lnc-FSIP1-4:40