Transcript: lnc-FSIP1-4:43

Basic information

LNCipedia transcript ID: lnc-FSIP1-4:43 
LNCipedia gene ID: lnc-FSIP1-4
Ensembl Gene ID: ENSG00000259345
Ensembl Transcript ID: ENST00000647271
Location (hg38): chr15:39071503-39196004
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2131 bp
Exons: 3
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000647271.1
Alternative gene names: ENSG00000259345.6; AC013652.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -79.6809 non-coding 
CPAT coding probability 1.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FSIP1-4:43 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-VPS39-60:24
5.1 lnc-VPS39-60:24
5.2 lnc-FSIP1-4:43