Transcript: lnc-FTH1-2:1

Basic information

LNCipedia transcript ID: lnc-FTH1-2:1 
LNCipedia gene ID: lnc-FTH1-2
Ensembl Gene ID: ENSG00000255553
Ensembl Transcript ID: ENST00000524942
Location (hg38): chr11:62077277-62082184
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 788 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000524942; ENST00000524942.1; RP11-810P12.5-001; OTTHUMT00000394848.1; NONHSAT021734
Alternative gene names: ENSG00000255553; RP11-810P12.5; ENSG00000255553.1; OTTHUMG00000167502.1; AP003733.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -8.5245 non-coding 
CPAT coding probability 4.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FTH1-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FTH1-2:1
3.1 lnc-FTH1-2:1
4.0 lnc-FTH1-2:1
4.1 lnc-FTH1-2:1
5.0 lnc-FTH1-2:1
5.1 lnc-LTBP3-143:1
5.2 lnc-FTH1-2:1