Transcript: lnc-FTL-1:2

Basic information

LNCipedia transcript ID: lnc-FTL-1:2 
LNCipedia gene ID: lnc-FTL-1
Ensembl Gene ID: ENSG00000267898
Ensembl Transcript ID: ENST00000594305
Location (hg38): chr19:48963990-48965029
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 770 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT067133; ENST00000594305.1
Alternative gene names: ENSG00000267898.1; CTD-2639E6.9; AC026803.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -413.6563 non-coding 
CPAT coding probability 20.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FTL-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FTL-1:2
4.0 lnc-FTL-1:2
4.1 lnc-FTL-1:2
5.0 lnc-FTL-1:2
5.1 lnc-RPS11-24:2
5.2 lnc-FTL-1:2