Transcript: lnc-FXYD2-1:6

Basic information

LNCipedia transcript ID: lnc-FXYD2-1:6 
LNCipedia gene ID: lnc-FXYD2-1
Location (hg38): chr11:117838000-117842261
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 684 bp
Exons: 7
Sources: NONCODE v4
Alternative transcript names: NONHSAT024426
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1060.3653 coding 
CPAT coding probability 69.18% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-FXYD2-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FXYD6-1:4
4.0 lnc-FXYD6-1:4
4.1 lnc-FXYD6-1:4
5.0 lnc-FXYD6-1:4
5.1 lnc-SCN4B-19:4
5.2 lnc-FXYD2-1:6