Transcript: lnc-FZD10-9:1

Basic information

LNCipedia transcript ID: lnc-FZD10-9:1 
LNCipedia gene ID: lnc-FZD10-9
Ensembl Gene ID: ENSG00000276122
Ensembl Transcript ID: ENST00000611525
Location (hg38): chr12:130138693-130140768
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2076 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000611525.1
Alternative gene names: ENSG00000276122.1; RP11-143E21.3; AC026336.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -17.3118 non-coding 
CPAT coding probability 37.81% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-FZD10-9:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-FZD10-9:1
4.1 lnc-FZD10-9:1
5.0 lnc-FZD10-9:1
5.1 lnc-RAN-13:1
5.2 lnc-FZD10-9:1