Transcript: lnc-FZD4-1:3

Basic information

LNCipedia transcript ID: lnc-FZD4-1:3 
LNCipedia gene ID: lnc-FZD4-1
Location (hg38): chr11:86910127-86922098
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2752 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT023502
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -1.5133 non-coding 
CPAT coding probability 1.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FZD4-1:3 no no no no

Available literature

  1. Tørring (2014), Long non-coding RNA expression profiles in hereditary haemorrhagic telangiectasia., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FZD4-1:3
4.0 lnc-FZD4-1:3
4.1 lnc-FZD4-1:3
5.0 lnc-FZD4-1:3
5.1 lnc-CREBZF-24:6
5.2 lnc-FZD4-1:3