Transcript: lnc-FZD8-2:1

Basic information

LNCipedia transcript ID: lnc-FZD8-2:1 
LNCipedia gene ID: lnc-FZD8-2
Ensembl Gene ID: ENSG00000273312
Ensembl Transcript ID: ENST00000609313
Location (hg38): chr10:35606001-35608153
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2153 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT012739; ENST00000609313.1
Alternative gene names: ENSG00000273312.1; RP11-425A6.5; ENSG00000273312.2; AL121749.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -69.8258 non-coding 
CPAT coding probability 0.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FZD8-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FZD8-2:1
4.0 lnc-FZD8-2:1
4.1 lnc-FZD8-2:1
5.0 lnc-FZD8-2:1
5.1 lnc-CUL2-7:1
5.2 lnc-FZD8-2:1