Transcript: lnc-FZD8-2:3

Basic information

LNCipedia transcript ID: lnc-FZD8-2:3 
LNCipedia gene ID: lnc-FZD8-2
Ensembl Gene ID: ENSG00000273312
Ensembl Transcript ID: ENST00000635993
Location (hg38): chr10:35604485-35608022
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1768 bp
Exons: 2
Sources: Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000635993.1
Alternative gene names: ENSG00000273312.2; RP11-425A6.5; AL121749.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -171.9718 non-coding 
CPAT coding probability 8.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FZD8-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FZD8-2:3
5.0 lnc-FZD8-2:3
5.1 lnc-CUL2-7:2
5.2 lnc-FZD8-2:3