Transcript: lnc-GABPA-13:5

Basic information

LNCipedia transcript ID: lnc-GABPA-13:5 
LNCipedia gene ID: lnc-GABPA-13
Location (hg38): chr21:26170881-26216047
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 591 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000273492.1|FTMT28300009159.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 1.6153 non-coding 
CPAT coding probability 0.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GABPA-13:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GABPA-13:5
5.0 lnc-GABPA-13:5
5.1 lnc-OLIG1-63:4
5.2 lnc-GABPA-13:5