Transcript: lnc-GABPA-13:6

Basic information

LNCipedia transcript ID: lnc-GABPA-13:6 
LNCipedia gene ID: lnc-GABPA-13
Location (hg38): chr21:26170881-26217381
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1969 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000273492.1|ENST00000608591.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 10.9058 non-coding 
CPAT coding probability 0.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GABPA-13:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GABPA-13:6
5.0 lnc-GABPA-13:6
5.1 lnc-OLIG1-63:5
5.2 lnc-GABPA-13:6