Transcript: lnc-GADD45B-1:1

Basic information

LNCipedia transcript ID: lnc-GADD45B-1:1 
LNCipedia gene ID: lnc-GADD45B-1
Location (hg38): chr19:2414243-2654271
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 2592 bp
Exons: 4
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000499536
Alternative gene names: ENSG00000247581


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 26.3049 non-coding 
CPAT coding probability 19.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GADD45B-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GADD45B-1:1
3.1 lnc-GADD45B-1:1
4.0 lnc-GADD45B-1:1
4.1 lnc-GADD45B-1:1
5.0 lnc-GADD45B-1:1
5.1 lnc-RPL36-95:1
5.2 lnc-GADD45B-1:1