Transcript: lnc-GADD45G-5:6

Basic information

LNCipedia transcript ID: lnc-GADD45G-5:6 
LNCipedia gene ID: lnc-GADD45G-5
RefSeq ID: NR_109791
Location (hg38): chr9:89969416-89987486
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 531 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_109791; NR_109791.1
Alternative gene names: LOC101927847


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -87.6092 non-coding 
CPAT coding probability 1.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GADD45G-5:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GADD45G-5:6
4.0 lnc-GADD45G-5:6
4.1 lnc-GADD45G-5:6
5.0 lnc-GADD45G-5:6
5.1 lnc-SECISBP2-14:2
5.2 lnc-GADD45G-5:6