Transcript: lnc-GALC-3:4

Basic information

LNCipedia transcript ID: lnc-GALC-3:4 
LNCipedia gene ID: lnc-GALC-3
Location (hg38): chr14:87573516-87725980
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 369 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00022824; NONHSAT038158
Alternative gene names: XLOC_011096; linc-SEL1L-7


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -287.5503 non-coding 
CPAT coding probability 0.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GALC-3:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GALC-3:4
3.1 lnc-GALC-3:4
4.0 lnc-GALC-3:4
4.1 lnc-GALC-3:4
5.0 lnc-GALC-3:4
5.1 lnc-GALC-3:4
5.2 lnc-GALC-3:4