Transcript: lnc-GALC-8:1

Basic information

LNCipedia transcript ID: lnc-GALC-8:1 
LNCipedia gene ID: lnc-GALC-8
Location (hg38): chr14:85525133-85529988
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1747 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014
Alternative transcript names: TCONS_00022380; ENST00000380722; ENST00000380722.1; RP11-497E19.1-001; OTTHUMT00000413191.1
Alternative gene names: XLOC_011093; linc-SEL1L-3; ENSG00000205562; RP11-497E19.1; ENSG00000205562.1; OTTHUMG00000171370.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -134.7861 non-coding 
CPAT coding probability 1.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GALC-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GALC-7:1
3.1 lnc-GALC-8:1
4.0 lnc-GALC-8:1
4.1 lnc-GALC-8:1
5.0 lnc-GALC-8:1
5.1 lnc-GALC-30:6
5.2 lnc-GALC-8:1