Transcript: lnc-GALK1-2:7

Basic information

LNCipedia transcript ID: lnc-GALK1-2:7 
LNCipedia gene ID: lnc-GALK1-2
Location (hg38): chr17:75778072-75779772
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1701 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT055941
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score 980.7941 coding 
CPAT coding probability 16.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-GALK1-2:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GALK1-2:3
4.0 lnc-H3F3B-2:3
4.1 lnc-H3F3B-2:3
5.0 lnc-H3F3B-2:3
5.1 lnc-CASKIN2-12:3
5.2 lnc-GALK1-2:7