Transcript: lnc-GALNT1-2:2

Basic information

LNCipedia transcript ID: lnc-GALNT1-2:2 
LNCipedia gene ID: lnc-GALNT1-2
Location (hg38): chr18:35581117-35654593
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 272 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT058938
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 1.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-GALNT1-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GALNT1-2:2
4.0 lnc-GALNT1-2:2
4.1 lnc-GALNT1-2:2
5.0 lnc-GALNT1-2:2
5.1 lnc-RIOK3-182:2
5.2 lnc-GALNT1-2:2