Transcript: lnc-GALNT15-8:6

Basic information

LNCipedia transcript ID: lnc-GALNT15-8:6 
LNCipedia gene ID: lnc-GALNT15-8
Location (hg38): chr3:15964829-15980698
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 11824 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000059277.1|ENCT00000286013.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 7.766 non-coding 
CPAT coding probability 0.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GALNT15-8:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GALNTL2-5:7
5.0 lnc-GALNTL2-5:7
5.1 lnc-MKRN2-45:6
5.2 lnc-GALNT15-8:6