Transcript: lnc-GALR1-5:3

Basic information

LNCipedia transcript ID: lnc-GALR1-5:3 
LNCipedia gene ID: lnc-GALR1-5
Location (hg38): chr18:77112606-77114156
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 549 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000036636.1|MICT00000164488.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 45.6474 non-coding 
CPAT coding probability 1.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-GALR1-5:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GALR1-5:3
5.0 lnc-GALR1-5:3
5.1 lnc-KCNG2-26:2
5.2 lnc-GALR1-5:3