Transcript: lnc-GANC-1:3

Basic information

LNCipedia transcript ID: lnc-GANC-1:3 
LNCipedia gene ID: lnc-GANC-1
Location (hg38): chr15:42208401-42209514
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 473 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000261002.1|HBMT00000482558.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -296.4076 non-coding 
CPAT coding probability 1.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GANC-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GANC-1:3
5.0 lnc-GANC-1:3
5.1 lnc-TMEM62-11:1
5.2 lnc-GANC-1:3