Transcript: lnc-GAS6-8:1

Basic information

LNCipedia transcript ID: lnc-GAS6-8:1 
LNCipedia gene ID: lnc-GAS6-8
RefSeq ID: NR_028064
Location (hg38): chr13:113748511-113751089
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2579 bp
Exons: 1
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT035371; NR_028064; NR_028064.1
Alternative gene names: ; LINC00552


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 83.0316 coding 
CPAT coding probability 98.55% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-GAS6-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GAS6-6:1
4.0 LINC00552:1
4.1 LINC00552:1
5.0 LINC00552:1
5.1 lnc-GAS6-7:1
5.2 lnc-GAS6-8:1