Transcript: lnc-GATA3-7:6

Basic information

LNCipedia transcript ID: lnc-GATA3-7:6 
LNCipedia gene ID: lnc-GATA3-7
Location (hg38): chr10:8970130-8978090
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1721 bp
Exons: 3
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA155:3
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -169.7757 non-coding 
CPAT coding probability 1.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GATA3-7:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-GATA3-7:6
4.1 lnc-GATA3-7:6
5.0 lnc-GATA3-7:6
5.1 lnc-NPY4R2-415:6
5.2 lnc-GATA3-7:6