Transcript: lnc-GATA5-10:2

Basic information

LNCipedia transcript ID: lnc-GATA5-10:2 
LNCipedia gene ID: lnc-GATA5-10
Location (hg38): chr20:62637242-62651348
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 542 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT080769
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -119.7922 non-coding 
CPAT coding probability 0.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GATA5-10:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-93B14.6.1-6:1
4.0 lnc-RP11-93B14.6.1-6:1
4.1 lnc-RP11-93B14.6.1-6:1
5.0 lnc-RP11-93B14.6.1-6:1
5.1 lnc-SPATA2-174:2
5.2 lnc-GATA5-10:2