Transcript: lnc-GBE1-5:8

Basic information

LNCipedia transcript ID: lnc-GBE1-5:8 
LNCipedia gene ID: lnc-GBE1-5
Location (hg38): chr3:80741712-80770376
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 16789 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000065180.1|ENCT00000305444.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 12.203 non-coding 
CPAT coding probability 0.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GBE1-5:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GBE1-5:8
5.0 lnc-GBE1-5:8
5.1 lnc-GBE1-5:8
5.2 lnc-GBE1-5:8