Transcript: lnc-GBP5-11:3

Basic information

LNCipedia transcript ID: lnc-GBP5-11:3 
LNCipedia gene ID: lnc-GBP5-11
Location (hg38): chr1:89818808-89821794
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2987 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000272931.1|HBMT00000068155.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -3.7716 non-coding 
CPAT coding probability 18.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GBP5-11:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GBP5-11:3
5.0 lnc-GBP5-11:3
5.1 lnc-GBP5-11:3
5.2 lnc-GBP5-11:3