Transcript: lnc-GCNT1-6:1

Basic information

LNCipedia transcript ID: lnc-GCNT1-6:1 
LNCipedia gene ID: lnc-GCNT1-6
Location (hg38): chr9:75954258-75977369
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 3735 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc010mpm_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -11.5002 non-coding 
CPAT coding probability 1.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GCNT1-6:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GCNT1-6:1
4.0 lnc-GCNT1-6:1
4.1 lnc-GCNT1-6:1
5.0 lnc-GCNT1-6:1
5.1 lnc-ANXA1-24:1
5.2 lnc-GCNT1-6:1