Transcript: lnc-GDAP2-2:1

Basic information

LNCipedia transcript ID: lnc-GDAP2-2:1 
LNCipedia gene ID: lnc-GDAP2-2
Location (hg38): chr1:117836454-117857944
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4976 bp
Exons: 9
Sources: NONCODE v4
Alternative transcript names: NONHSAT005499
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -5.7092 non-coding 
CPAT coding probability 0.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GDAP2-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GDAP2-2:1
4.0 lnc-GDAP2-2:1
4.1 lnc-GDAP2-2:1
5.0 lnc-GDAP2-2:1
5.1 lnc-WARS2-13:1
5.2 lnc-GDAP2-2:1