Transcript: lnc-GDF5OS-2:1

Basic information

LNCipedia transcript ID: lnc-GDF5OS-2:1 
LNCipedia gene ID: lnc-GDF5OS-2
Location (hg38): chr20:35412090-35412584
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 495 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000053098.1|HBMT00000886485.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -231.1083 non-coding 
CPAT coding probability 0.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GDF5OS-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GDF5OS-2:1
5.0 lnc-GDF5OS-2:1
5.1 lnc-PROCR-3:1
5.2 lnc-GDF5OS-2:1