Transcript: lnc-GDF9-1:2

Basic information

LNCipedia transcript ID: lnc-GDF9-1:2 
LNCipedia gene ID: lnc-GDF9-1
Location (hg38): chr5:132862466-132866884
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 541 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT103783
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -563.7586 non-coding 
CPAT coding probability 48.78% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-GDF9-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AFF4-1:1
4.0 lnc-GDF9-1:2
4.1 lnc-GDF9-1:2
5.0 lnc-GDF9-1:2
5.1 lnc-TIFAB-58:1
5.2 lnc-GDF9-1:2