Transcript: lnc-GGCT-1:42

Basic information

LNCipedia transcript ID: lnc-GGCT-1:42 
LNCipedia gene ID: lnc-GGCT-1
Location (hg38): chr7:30548359-30562128
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 3328 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT119891
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -16.8605 non-coding 
CPAT coding probability 2.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GGCT-1:42 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GGCT-1:42
4.0 lnc-GGCT-1:42
4.1 lnc-GGCT-1:42
5.0 lnc-GGCT-1:42
5.1 lnc-PDE1C-13:71
5.2 lnc-GGCT-1:42